Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914484.1_cds_XP_016464469.1_57504
CDS Infomation

[gene=LOC107787415] [db_xref=GeneID:107787415] [protein=uncharacterized protein LOC107787415 isoform X3] [protein_id=XP_016464469.1] [location=complement(join(5731..5909,7009..7132,7927..8025,8123..8314,8450..8539,9261..9331,10947..11647,21040..21116))] [gbkey=CDS]
Sequence

ATGGCCGTTCGATTTGGTTCAAGATCCGTTGGTGGATTAGTCGCCTTGATGTCTGCTTCG
CCTCCCGCCACTGGCTTTTTGCTCTACCAAATCATATCGAAGAGAGCTATTGAGATGCAC
AATGTGAGAGCAACAAATGCACCTGATTTAGCTGCTTTTATAAACGATTTGGAGTTTAAT
ATCACTACCATCTCAAGTATGAGTTGCTTACACTTGCGTGGCCTCGGAACCGTGGTAACT
GGGAACCCAGGCTTCGTTGACTATCGATTTGCTCCTCTGTCAACATTTGCCAACTATTCC
TGTATAAACACTACTAAAGGACCAACTATCGTGCTTAAGTGCAGCAACTGTCCACTTAGT
CGAGATAGTGCCTATATTTCATGGCAATTTGTTGATCTCCCAAATAGTCCTGCAACAGCT
GTTGGATTTCAGTTCAACCTAACAGCAAAAGATCCTAAAAACAAGAAGCATCTGAGCTTG
GTCAGTGGAACACTGAGGAATGGAAGCAATTTTGATAACAAACCGGTTACATTTAGAGGG
CTGACAACAAATATATTGAAGTTCAATTTTTTCCCTAGAATGTACCATAACATGCATGAC
CTGAGGCTCATCCAACCACTACTTCATGAGTTTCTGCCAGGTTCATCTTTTAATGAGATA
AGTCAACTCCAAGCCTCAGTCCAAAGGCCTAATGATGGACTAATCAACACGACATTGTAT
GTCAACTTCCTATCTTCGTATATTGTTGAGATCAAGAATCAAAATGTTTTGGGGCCTGTA
AGCTTCCTTGCGGATCTTGGTGGCCTTTATTGCATCAGTATTGGCCTCTTCTTCTACATT
TTGGTGCAGTGTGAATATAGGATCAAGAAATTACGCAATGAGGATAGTGTAATGCGGAAG
GTTAGAAGTCGCCGAAAAGCTCAAGACCGCTGGGATAAACTGAGGAAATATGTGATGTAC
ACATATGCTCCTAACCAATTGGAAGAGGTGTACGACATGAGAAATGATGGTTGTTGCACA
GGTGTCAAGATGGAATCACTCAACAGAAAGAGCTCTTCAGTTAAAGGAAGAGGGTCTAGC
AGATTAGATACCATCAGTTTTAGCCGAAAAGTTAGCTTACCTAGTGAGAAGAGAGCCATT
TCAGAGCAGATTGATACTCAAAGTGCCACGCTTTTTTTGCCTGAATCTGCAGCAGATCGC
CGAAAGAGTACACGTCTGAAGGAAGAAAGATTTCAAGAAAATGCTGTACCTCCAAACACG
AAAGATAGTAAACCTGAAGATTTAGATAATGTTATCCAGGCTCCAGCTTTTCCTGCAGCT
GACAACTTAACTGTTCCACCTCCGCCTCCATTAGAATCACAGGCTGCTGATCATATAAGT
ATGACCATTCTCCAGAAAGATCTCCAAAACCTCTACGAATACAATATGTTGCTCAGGGAA
AAGTTGATTGCTGCCCAGTCAATGCTTCATGCATTATCCAACAAGGATTCGATTTTAGCA
GCTAATAATGATGATATTATTAGTAGAGAATGA

Peptide Sequence

PEP ID

XP_016464469.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107787415 isoform X3 [Nicotiana tabacum]
Sequence

MAVRFGSRSVGGLVALMSASPPATGFLLYQIISKRAIEMHNVRATNAPDLAAFINDLEFN
ITTISSMSCLHLRGLGTVVTGNPGFVDYRFAPLSTFANYSCINTTKGPTIVLKCSNCPLS
RDSAYISWQFVDLPNSPATAVGFQFNLTAKDPKNKKHLSLVSGTLRNGSNFDNKPVTFRG
LTTNILKFNFFPRMYHNMHDLRLIQPLLHEFLPGSSFNEISQLQASVQRPNDGLINTTLY
VNFLSSYIVEIKNQNVLGPVSFLADLGGLYCISIGLFFYILVQCEYRIKKLRNEDSVMRK
VRSRRKAQDRWDKLRKYVMYTYAPNQLEEVYDMRNDGCCTGVKMESLNRKSSSVKGRGSS
RLDTISFSRKVSLPSEKRAISEQIDTQSATLFLPESAADRRKSTRLKEERFQENAVPPNT
KDSKPEDLDNVIQAPAFPAADNLTVPPPPPLESQAADHISMTILQKDLQNLYEYNMLLRE
KLIAAQSMLHALSNKDSILAANNDDIISRE

Transcript Sequence

Gene sequence data has not been registered.